Coding

Part:BBa_K5091008

Designed by: Angelina Oblak   Group: iGEM24_ULethbridge   (2024-09-30)


pmsC

The pmsC gene from Pseudomonas fluorescens A506 encodes isochorismate synthase (ICS), an enzyme involved in the biosynthesis of salicylic acid (SA). This gene plays a critical role in the first step of the two-enzyme pathway that converts chorismate to salicylic acid, a key signaling molecule in plant defense. Isochorismate synthase catalyzes the conversion of chorismate into isochorismate, which is then further processed by isochorismate pyruvate lyase (encoded by pmsB) to produce salicylic acid.

Salicylic acid is an important compound in plant-microbe interactions, known for inducing systemic acquired resistance (SAR) in plants and enhancing their immune response against various pathogens. The production of SA by Pseudomonas fluorescens A506 makes this gene valuable for projects focused on biological control or improving plant immunity. PmsC, when expressed in combination with pmsB, can be used to biosynthesize salicylic acid in microbial systems or engineered organisms.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal PstI site found at 112
    Illegal PstI site found at 493
    Illegal PstI site found at 871
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 112
    Illegal PstI site found at 493
    Illegal PstI site found at 871
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 654
    Illegal BamHI site found at 852
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal PstI site found at 112
    Illegal PstI site found at 493
    Illegal PstI site found at 871
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal PstI site found at 112
    Illegal PstI site found at 493
    Illegal PstI site found at 871
  • 1000
    COMPATIBLE WITH RFC[1000]


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Parameters
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